Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | SSED_RS00140 | Not Available | Negative | 34180 - 34488 | 11528.0 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SSED_RS00145 | Not Available | Positive | 34690 - 35229 | 20371.3 |
| hypothetical protein | SSED_RS00150 | Not Available | Positive | 35726 - 36166 | 16731.8 |
| trkh family potassium uptake protein | SSED_RS00155 | Not Available | Negative | 36602 - 38044 | 53025.5 |
| trk system potassium transporter trka | SSED_RS00160 | Not Available | Negative | 38087 - 39496 | 51770.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | SSED_RS00165 | Not Available | Negative | 39506 - 40786 | 47627.2 |
| methionyl-trna formyltransferase | SSED_RS00170 | Not Available | Negative | 40788 - 41777 | 35603.8 |
| peptide deformylase | SSED_RS00175 | Not Available | Negative | 41785 - 42297 | 19258.1 |
| lysm peptidoglycan-binding domain-containing protein | SSED_RS00180 | Not Available | Positive | 42423 - 43526 | 40943.5 |
| dna-processing protein dpra | SSED_RS00185 | Not Available | Positive | 43652 - 44671 | 36684.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
