Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SSED_RS02520 | Not Available | Positive | 591917 - 592129 | 7713.63 |
| tlpa family protein disulfide reductase | SSED_RS02525 | Not Available | Negative | 592264 - 592842 | 21757.4 |
| cytochrome c-type biogenesis protein ccmh | SSED_RS02530 | Not Available | Negative | 592835 - 593263 | 16268.0 |
| heme lyase ccmf/nrfe family subunit | SSED_RS02535 | Not Available | Negative | 593260 - 595230 | 72063.5 |
| cytochrome c3 family protein | SSED_RS02540 | Not Available | Positive | 595777 - 597813 | 75781.9 |
| rhodanese-like domain-containing protein | SSED_RS02545 | Not Available | Positive | 597886 - 598314 | 15950.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SSED_RS02550 | Not Available | Positive | 598369 - 599157 | 28486.9 |
| tetratricopeptide repeat protein | SSED_RS02555 | Not Available | Positive | 599191 - 599898 | 26802.4 |
| 4fe-4s dicluster domain-containing protein | SSED_RS02560 | Not Available | Positive | 599949 - 600653 | 25433.6 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | SSED_RS02565 | Not Available | Positive | 600656 - 601603 | 34064.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
