Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1439 domain-containing protein | SSED_RS22300 | Not Available | Positive | 5253100 - 5253639 | 20367.0 |
| cina family nicotinamide mononucleotide deamidase-related protein | SSED_RS22305 | Not Available | Negative | 5253716 - 5254990 | 45636.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5255523 - 5255638 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 5255750 - 5258645 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5258984 - 5260526 | Not Available |
| tlpa family protein disulfide reductase | SSED_RS22325 | Not Available | Negative | 5261231 - 5261809 | 21609.2 |
| heme lyase nrfefg subunit nrff | SSED_RS22330 | Not Available | Negative | 5261806 - 5262288 | 18552.5 |
| dsbe family thiol:disulfide interchange protein | SSED_RS22335 | Not Available | Negative | 5262285 - 5262842 | 21197.8 |
| heme lyase ccmf/nrfe family subunit | SSED_RS22340 | Not Available | Negative | 5262860 - 5264839 | 72728.7 |
| c-type cytochrome biogenesis protein ccmi | SSED_RS22345 | Not Available | Positive | 5265249 - 5266496 | 45666.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
