Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxa | SSED_RS21415 | Not Available | Positive | 5027685 - 5028011 | 11849.2 |
| transcription termination factor rho | SSED_RS21420 | Not Available | Positive | 5028267 - 5029532 | 47158.2 |
| lysr family transcriptional regulator | SSED_RS21425 | Not Available | Negative | 5029811 - 5030713 | 33784.8 |
| fumarate reductase iron-sulfur subunit | SSED_RS21430 | Not Available | Negative | 5030827 - 5031558 | 27322.4 |
| fumarate reductase flavoprotein subunit | SSED_RS21435 | Not Available | Negative | 5031555 - 5033579 | 74221.8 |
| fumarate reductase cytochrome b subunit | SSED_RS21440 | Not Available | Negative | 5033691 - 5034359 | 24186.6 |
| fumarate reductase cytochrome b subunit | SSED_RS21445 | Not Available | Negative | 5034518 - 5035243 | 26905.8 |
| 50s ribosomal protein l11 methyltransferase | SSED_RS21450 | Not Available | Positive | 5035768 - 5036649 | 32761.7 |
| trna dihydrouridine synthase dusb | SSED_RS21455 | Not Available | Positive | 5036801 - 5037769 | 35832.3 |
| dna-binding transcriptional regulator fis | SSED_RS21460 | Not Available | Positive | 5037788 - 5038093 | 11411.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
