Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | SSED_RS20680 | Not Available | Negative | 4844395 - 4845279 | 32991.1 |
| cation:proton antiporter | SSED_RS20685 | Not Available | Positive | 4845402 - 4846610 | 43191.8 |
| duf5062 family protein | SSED_RS20690 | Not Available | Positive | 4846844 - 4847104 | 9907.28 |
| 30s ribosomal protein s6--l-glutamate ligase | SSED_RS25000 | Not Available | Negative | 4847213 - 4848100 | 31988.0 |
| elongation factor tu | SSED_RS25005 | Not Available | Negative | 4848185 - 4848583 | 14958.1 |
| biotin carboxylase n-terminal domain-containing protein | SSED_RS20700 | Not Available | Negative | 4848849 - 4853402 | 167797.0 |
| lysr family transcriptional regulator | SSED_RS20705 | Not Available | Positive | 4853524 - 4854435 | 33408.5 |
| hypothetical protein | SSED_RS20710 | Not Available | Positive | 4855081 - 4856253 | 42762.9 |
| sprt family zinc-dependent metalloprotease | SSED_RS20715 | Not Available | Positive | 4856335 - 4856910 | 21883.4 |
| endonuclease | SSED_RS20720 | Not Available | Positive | 4857139 - 4857888 | 28607.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
