Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular exonuclease exem | SSED_RS20580 | Not Available | Negative | 4816395 - 4819052 | 94455.4 |
| extracellular exonuclease exem | SSED_RS20585 | Not Available | Negative | 4819536 - 4822214 | 96206.8 |
| helix-turn-helix transcriptional regulator | SSED_RS20590 | Not Available | Negative | 4822918 - 4823583 | 25124.7 |
| duf2238 domain-containing protein | SSED_RS20595 | Not Available | Negative | 4823883 - 4824494 | 23169.7 |
| phosphoglycerate dehydrogenase | SSED_RS20600 | Not Available | Positive | 4824711 - 4825946 | 44450.6 |
| pp_04003 | SSED_RS20605 | Not Available | Positive | 4826091 - 4827056 | Not Available |
| trar/dksa c4-type zinc finger protein | SSED_RS20610 | Not Available | Positive | 4827258 - 4827617 | 13388.2 |
| cation:proton antiporter | SSED_RS20615 | Not Available | Positive | 4827736 - 4828980 | 44718.2 |
| tlpa family protein disulfide reductase | SSED_RS20620 | Not Available | Negative | 4829202 - 4829768 | 20921.2 |
| hypothetical protein | SSED_RS20625 | Not Available | Negative | 4829891 - 4830301 | 14624.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
