Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf134 domain-containing protein | SSED_RS20430 | Not Available | Positive | 4781546 - 4781836 | 10582.0 |
| nifb/nifx family molybdenum-iron cluster-binding protein | SSED_RS25195 | Not Available | Positive | 4781901 - 4782548 | 22484.8 |
| hd-gyp domain-containing protein | SSED_RS20440 | Not Available | Negative | 4782707 - 4783777 | 40477.4 |
| tryptophanase | SSED_RS20445 | Not Available | Negative | 4784049 - 4785446 | 52165.6 |
| hypothetical protein | SSED_RS20450 | Not Available | Negative | 4785784 - 4786404 | 22988.5 |
| oxidative stress defense protein | SSED_RS20455 | Not Available | Positive | 4786721 - 4787425 | 25928.4 |
| cation:proton antiporter | SSED_RS20460 | Not Available | Negative | 4787501 - 4789549 | 76162.6 |
| substrate-binding periplasmic protein | SSED_RS20465 | Not Available | Positive | 4789960 - 4790700 | 28506.1 |
| lysr family transcriptional regulator | SSED_RS20470 | Not Available | Positive | 4790860 - 4791756 | 33333.1 |
| lutc/ykgg family protein | SSED_RS20475 | Not Available | Negative | 4791812 - 4792381 | 20108.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
