Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | SSED_RS20235 | Not Available | Positive | 4727308 - 4727646 | 12600.2 |
| response regulator transcription factor | SSED_RS20240 | Not Available | Positive | 4727694 - 4728368 | 25438.6 |
| atp-binding protein | SSED_RS20245 | Not Available | Positive | 4728365 - 4729690 | 49327.0 |
| flavocytochrome c | SSED_RS20250 | Not Available | Negative | 4730169 - 4731959 | 63289.1 |
| atp-binding protein | SSED_RS20255 | Not Available | Positive | 4732302 - 4734380 | 77753.0 |
| sigma-54-dependent transcriptional regulator | SSED_RS20260 | Not Available | Positive | 4734377 - 4735759 | 51011.4 |
| sensor histidine kinase | SSED_RS20265 | Not Available | Negative | 4735808 - 4737850 | 75818.1 |
| urea abc transporter substrate-binding protein | SSED_RS20270 | Not Available | Negative | 4737847 - 4739082 | 46421.8 |
| dicarboxylate/amino acid:cation symporter | SSED_RS20275 | Not Available | Negative | 4739244 - 4740518 | 44572.3 |
| hypothetical protein | SSED_RS20280 | Not Available | Negative | 4741037 - 4742257 | 46293.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
