Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | SSED_RS00040 | Not Available | Positive | 7614 - 8696 | 40705.2 |
| dna topoisomerase (atp-hydrolyzing) subunit b | SSED_RS00045 | Not Available | Positive | 8713 - 11130 | 89863.6 |
| 5-oxoprolinase subunit pxpa | SSED_RS00050 | Not Available | Negative | 11580 - 12326 | 26865.6 |
| biotin-dependent carboxyltransferase family protein | SSED_RS00055 | Not Available | Negative | 12470 - 13456 | 35699.5 |
| 5-oxoprolinase subunit pxpb | SSED_RS00060 | Not Available | Negative | 13485 - 14171 | 25282.5 |
| hdod domain-containing protein | SSED_RS00065 | Not Available | Positive | 14650 - 15705 | 39504.9 |
| glycine--trna ligase subunit beta | SSED_RS00070 | Not Available | Negative | 15774 - 17843 | 75460.8 |
| glycine--trna ligase subunit alpha | SSED_RS00075 | Not Available | Negative | 17855 - 18760 | 34399.0 |
| dna-3-methyladenine glycosylase i | SSED_RS00080 | Not Available | Positive | 18923 - 19507 | 21970.0 |
| 3-phenylpropionate mfs transporter | SSED_RS00085 | Not Available | Positive | 19576 - 20742 | 42550.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
