Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein nlpe | SSED_RS19270 | Not Available | Positive | 4489961 - 4490482 | 19068.8 |
| uracil-dna glycosylase | SSED_RS19275 | Not Available | Negative | 4490466 - 4491134 | 24789.4 |
| type ii secretion system protein | SSED_RS19280 | Not Available | Positive | 4491369 - 4491929 | 19865.7 |
| type ii secretion system protein | SSED_RS19285 | Not Available | Positive | 4492008 - 4492565 | 20212.7 |
| duf3144 domain-containing protein | SSED_RS19290 | Not Available | Positive | 4493018 - 4493317 | 11024.7 |
| lyse family translocator | SSED_RS19295 | Not Available | Negative | 4493653 - 4494309 | 22755.7 |
| sigma-54 interaction domain-containing protein | SSED_RS19300 | Not Available | Positive | 4494482 - 4495942 | 54272.8 |
| cytochrome c oxidase accessory protein ccog | SSED_RS19305 | Not Available | Positive | 4496154 - 4497599 | 54820.2 |
| amp-binding protein | SSED_RS19310 | Not Available | Positive | 4498134 - 4499738 | 58114.6 |
| alpha/beta hydrolase | SSED_RS19315 | Not Available | Negative | 4499913 - 4500944 | 37598.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
