Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(18)-2'-o)-methyltransferase trmh | SSED_RS01715 | Not Available | Negative | 385804 - 386499 | 26060.2 |
| rida family protein | SSED_RS01720 | Not Available | Negative | 386567 - 386950 | 13861.7 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | SSED_RS01725 | Not Available | Negative | 387040 - 389145 | 78924.3 |
| dna-directed rna polymerase subunit omega | SSED_RS01730 | Not Available | Negative | 389159 - 389443 | 10313.3 |
| guanylate kinase | SSED_RS01735 | Not Available | Negative | 389500 - 390123 | 22996.2 |
| duf805 domain-containing protein | SSED_RS01740 | Not Available | Positive | 390490 - 391557 | 38471.4 |
| ntp transferase domain-containing protein | SSED_RS01745 | Not Available | Positive | 391663 - 392631 | 35951.9 |
| phosphotransferase enzyme family protein | SSED_RS01750 | Not Available | Positive | 392628 - 393704 | 40283.0 |
| duf3360 family protein | SSED_RS01755 | Not Available | Negative | 394139 - 395614 | 52775.7 |
| hypothetical protein | SSED_RS01760 | Not Available | Positive | 395907 - 396092 | 6388.49 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
