Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | SSED_RS18215 | Not Available | Positive | 4240888 - 4241523 | 24419.2 |
| ribosome silencing factor | SSED_RS18220 | Not Available | Positive | 4241640 - 4241969 | 12383.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | SSED_RS18225 | Not Available | Positive | 4241969 - 4242439 | 17373.1 |
| penicillin-binding protein 2 | SSED_RS18230 | Not Available | Positive | 4242522 - 4244378 | 69711.6 |
| rod shape-determining protein roda | SSED_RS18235 | Not Available | Positive | 4244375 - 4245481 | 40775.4 |
| lytic murein transglycosylase b | SSED_RS18240 | Not Available | Positive | 4245673 - 4246692 | 37955.0 |
| septal ring lytic transglycosylase rlpa family protein | SSED_RS18245 | Not Available | Positive | 4246679 - 4247476 | 29516.2 |
| serine hydrolase | SSED_RS18250 | Not Available | Positive | 4247637 - 4248809 | 43242.5 |
| duf493 family protein ybed | SSED_RS18255 | Not Available | Positive | 4248948 - 4249214 | 9757.64 |
| lipoyl(octanoyl) transferase lipb | SSED_RS18260 | Not Available | Positive | 4249364 - 4250023 | 24451.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
