Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 5-hydroxyuridine modification protein yegq | SSED_RS17470 | Not Available | Positive | 4063001 - 4064386 | 51753.5 |
| yfhl family 4fe-4s dicluster ferredoxin | SSED_RS17475 | Not Available | Positive | 4064404 - 4064661 | 9443.22 |
| eal domain-containing protein | SSED_RS23740 | Not Available | Negative | 4064838 - 4068005 | 118259.0 |
| hypothetical protein | SSED_RS17485 | Not Available | Positive | 4068447 - 4068719 | 10772.2 |
| diguanylate cyclase domain-containing protein | SSED_RS17490 | Not Available | Negative | 4068820 - 4070073 | 47211.5 |
| acyl-coa dehydrogenase | SSED_RS17495 | Not Available | Negative | 4070227 - 4072029 | 68774.2 |
| hydrogenase maturation protein | SSED_RS17500 | Not Available | Negative | 4072297 - 4074063 | 65855.4 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | SSED_RS17505 | Not Available | Negative | 4074147 - 4074659 | 19171.3 |
| ubiquinone anaerobic biosynthesis protein ubiu | SSED_RS17510 | Not Available | Positive | 4074834 - 4075835 | 36929.0 |
| u32 family peptidase | SSED_RS17515 | Not Available | Positive | 4075867 - 4076727 | 31760.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
