Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | SSED_RS16510 | Not Available | Negative | 3807934 - 3808428 | 18432.7 |
| outer membrane protein assembly factor bama | SSED_RS16515 | Not Available | Negative | 3808498 - 3810981 | 92583.1 |
| sigma e protease regulator rsep | SSED_RS16520 | Not Available | Negative | 3811011 - 3812396 | 50582.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SSED_RS16525 | Not Available | Negative | 3812416 - 3813603 | 42727.6 |
| phosphatidate cytidylyltransferase | SSED_RS16530 | Not Available | Negative | 3813607 - 3814464 | 31242.3 |
| isoprenyl transferase | SSED_RS16535 | Not Available | Negative | 3814483 - 3815277 | 29818.7 |
| ribosome recycling factor | SSED_RS16540 | Not Available | Negative | 3815358 - 3815915 | 20707.9 |
| ump kinase | SSED_RS16545 | Not Available | Negative | 3815990 - 3816727 | 26537.5 |
| translation elongation factor ts | SSED_RS16550 | Not Available | Negative | 3816817 - 3817665 | 30214.3 |
| 30s ribosomal protein s2 | SSED_RS16555 | Not Available | Negative | 3817800 - 3818528 | 26688.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
