Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein napf | SSED_RS24140 | Not Available | Positive | 3550253 - 3550741 | 18029.5 |
| bactofilin family protein | SSED_RS15410 | Not Available | Positive | 3550884 - 3551279 | 13834.5 |
| duf2982 domain-containing protein | SSED_RS15415 | Not Available | Negative | 3551442 - 3552119 | 25372.3 |
| ydcf family protein | SSED_RS15420 | Not Available | Negative | 3552166 - 3552921 | 27974.2 |
| fructokinase | SSED_RS15425 | Not Available | Negative | 3552960 - 3553850 | 31039.2 |
| capsule assembly wzi family protein | SSED_RS15430 | Not Available | Positive | 3554237 - 3555700 | 54552.4 |
| phosphatase | SSED_RS15435 | Not Available | Negative | 3556036 - 3556776 | 26755.7 |
| sigma-54-dependent transcriptional regulator | SSED_RS15440 | Not Available | Negative | 3556848 - 3558350 | 55359.4 |
| pas domain s-box protein | SSED_RS15445 | Not Available | Negative | 3558416 - 3561925 | 129626.0 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | SSED_RS15450 | Not Available | Negative | 3561925 - 3562845 | 33242.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
