Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rimk/lysx family protein | SSED_RS13660 | Not Available | Negative | 3154872 - 3155741 | 32582.4 |
| stas/sec14 domain-containing protein | SSED_RS13665 | Not Available | Negative | 3156009 - 3156392 | 14326.1 |
| duf3802 family protein | SSED_RS13670 | Not Available | Negative | 3156805 - 3157161 | 13325.1 |
| ycei family protein | SSED_RS13675 | Not Available | Negative | 3157292 - 3157867 | 20822.3 |
| pyridoxamine 5'-phosphate oxidase | SSED_RS13680 | Not Available | Negative | 3158305 - 3158946 | 24230.9 |
| agmatinase | SSED_RS13685 | Not Available | Negative | 3159010 - 3159930 | 33586.8 |
| adenosylmethionine decarboxylase | SSED_RS13690 | Not Available | Negative | 3159961 - 3160890 | 34887.2 |
| biosynthetic arginine decarboxylase | SSED_RS13695 | Not Available | Negative | 3160941 - 3162854 | 71203.8 |
| s1 rna-binding domain-containing protein | SSED_RS13700 | Not Available | Positive | 3163286 - 3164119 | 31074.7 |
| yceh family protein | SSED_RS13705 | Not Available | Positive | 3164260 - 3164925 | 24810.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
