Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | SSED_RS13365 | Not Available | Positive | 3090665 - 3091321 | 23266.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | SSED_RS13370 | Not Available | Positive | 3091318 - 3092058 | 26319.5 |
| imidazole glycerol phosphate synthase subunit hisf | SSED_RS13375 | Not Available | Positive | 3092126 - 3092899 | 28483.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | SSED_RS13380 | Not Available | Positive | 3092975 - 3093604 | 23182.4 |
| substrate-binding periplasmic protein | SSED_RS13385 | Not Available | Positive | 3093879 - 3094658 | 29241.3 |
| hypothetical protein | SSED_RS13390 | Not Available | Positive | 3094808 - 3095020 | 8342.36 |
| substrate-binding periplasmic protein | SSED_RS13395 | Not Available | Negative | 3095106 - 3095849 | 28453.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | SSED_RS13400 | Not Available | Positive | 3096246 - 3097352 | 41245.1 |
| hypothetical protein | SSED_RS13405 | Not Available | Negative | 3097458 - 3098027 | 22430.6 |
| ig-like domain-containing protein | SSED_RS13410 | Not Available | Negative | 3098020 - 3102111 | 147963.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
