Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00730 family rossman fold protein | SSED_RS12705 | Not Available | Positive | 2946922 - 2947605 | 25762.0 |
| efflux rnd transporter permease subunit | SSED_RS12710 | Not Available | Negative | 2947732 - 2950827 | 113204.0 |
| efflux rnd transporter periplasmic adaptor subunit | SSED_RS12715 | Not Available | Negative | 2950824 - 2951909 | 40201.3 |
| outer membrane protein assembly factor bamc | SSED_RS12720 | Not Available | Negative | 2952175 - 2953296 | 42320.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SSED_RS12725 | Not Available | Negative | 2953300 - 2954184 | 31075.6 |
| glycine cleavage system protein r | SSED_RS12730 | Not Available | Positive | 2954483 - 2955022 | 19758.7 |
| thioredoxin-dependent thiol peroxidase | SSED_RS12735 | Not Available | Positive | 2955045 - 2955515 | 17259.7 |
| lyse/argo family amino acid transporter | SSED_RS12740 | Not Available | Negative | 2955647 - 2956255 | 21489.7 |
| lysr family transcriptional regulator argp | SSED_RS12745 | Not Available | Positive | 2956387 - 2957274 | 33157.2 |
| ai-2e family transporter | SSED_RS12750 | Not Available | Negative | 2957400 - 2958485 | 39927.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
