Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SSED_RS12450 | Not Available | Negative | 2890016 - 2890468 | 17322.8 |
| l,d-transpeptidase family protein | SSED_RS12455 | Not Available | Negative | 2890472 - 2891881 | 53772.3 |
| sulfatase-like hydrolase/transferase | SSED_RS12465 | Not Available | Positive | 2892646 - 2894649 | 76041.7 |
| sensor domain-containing diguanylate cyclase | SSED_RS12470 | Not Available | Positive | 2894861 - 2896102 | 46530.7 |
| gtra family protein | SSED_RS25155 | Not Available | Negative | 2896178 - 2896549 | 13853.5 |
| glycosyltransferase family 2 protein | SSED_RS12480 | Not Available | Negative | 2896701 - 2897642 | 36098.0 |
| class i sam-dependent methyltransferase | SSED_RS12485 | Not Available | Negative | 2897686 - 2898417 | 28224.3 |
| hypothetical protein | SSED_RS12490 | Not Available | Negative | 2898488 - 2900095 | 61291.2 |
| secondary thiamine-phosphate synthase enzyme yjbq | SSED_RS12495 | Not Available | Positive | 2900562 - 2900981 | 15859.8 |
| transporter substrate-binding domain-containing protein | SSED_RS12500 | Not Available | Negative | 2901011 - 2901775 | 29539.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
