Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | SSED_RS12205 | Not Available | Negative | 2826099 - 2827076 | 35533.5 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | SSED_RS12210 | Not Available | Negative | 2827080 - 2828258 | 43700.9 |
| succinylglutamate desuccinylase | SSED_RS12215 | Not Available | Negative | 2828478 - 2829521 | 39325.9 |
| peptide-methionine (s)-s-oxide reductase msra | SSED_RS12220 | Not Available | Positive | 2829819 - 2830298 | 17881.7 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | SSED_RS12225 | Not Available | Negative | 2830647 - 2832302 | 59717.4 |
| replication initiation negative regulator seqa | SSED_RS12230 | Not Available | Negative | 2832381 - 2832923 | 20082.8 |
| alpha/beta fold hydrolase | SSED_RS12235 | Not Available | Positive | 2833215 - 2833991 | 28428.0 |
| duf2788 domain-containing protein | SSED_RS12240 | Not Available | Positive | 2834064 - 2834285 | 8149.29 |
| lexa regulated protein | SSED_RS12245 | Not Available | Positive | 2834297 - 2834572 | 10529.6 |
| flavodoxin flda | SSED_RS12250 | Not Available | Positive | 2834621 - 2835151 | 19979.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
