Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SSED_RS12105 | Not Available | Positive | 2797887 - 2799530 | 59681.3 |
| fad-dependent oxidoreductase | SSED_RS12110 | Not Available | Negative | 2799628 - 2801643 | 73871.1 |
| signal peptide peptidase sppa | SSED_RS12115 | Not Available | Positive | 2801807 - 2803645 | 66835.6 |
| asparaginase | SSED_RS12120 | Not Available | Positive | 2803811 - 2804824 | 36436.1 |
| yeac family protein | SSED_RS12125 | Not Available | Negative | 2804996 - 2805277 | 10940.1 |
| zinc ribbon domain-containing protein | SSED_RS12130 | Not Available | Negative | 2805274 - 2805591 | 11506.4 |
| m14-type cytosolic carboxypeptidase | SSED_RS12135 | Not Available | Negative | 2805664 - 2806791 | 42002.2 |
| response regulator transcription factor | SSED_RS12140 | Not Available | Negative | 2807019 - 2807699 | 25777.3 |
| duf885 domain-containing protein | SSED_RS12145 | Not Available | Negative | 2807920 - 2809698 | 67346.6 |
| atp-dependent dna helicase recq | SSED_RS12150 | Not Available | Negative | 2809881 - 2811827 | 72967.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
