Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1904 domain-containing protein | SSED_RS12010 | Not Available | Negative | 2773716 - 2774048 | 12771.3 |
| hypothetical protein | SSED_RS24450 | Not Available | Positive | 2774408 - 2774581 | 6531.38 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | SSED_RS12015 | Not Available | Positive | 2774783 - 2776240 | 53339.5 |
| acyl-coa dehydrogenase | SSED_RS12020 | Not Available | Negative | 2776424 - 2778181 | 63449.7 |
| duf2058 domain-containing protein | SSED_RS12025 | Not Available | Negative | 2778421 - 2778963 | 20793.0 |
| orotidine-5'-phosphate decarboxylase | SSED_RS12030 | Not Available | Negative | 2779074 - 2779778 | 25138.7 |
| lipopolysaccharide assembly protein lapb | SSED_RS12035 | Not Available | Negative | 2779883 - 2781043 | 44009.9 |
| lapa family protein | SSED_RS12040 | Not Available | Negative | 2781045 - 2781335 | 10863.7 |
| integration host factor subunit beta | SSED_RS12045 | Not Available | Negative | 2781458 - 2781745 | 10649.8 |
| 30s ribosomal protein s1 | SSED_RS12050 | Not Available | Negative | 2781817 - 2783484 | 61192.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
