Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | SSED_RS11320 | Not Available | Negative | 2619453 - 2622635 | 117736.0 |
| efflux rnd transporter periplasmic adaptor subunit | SSED_RS11325 | Not Available | Negative | 2622639 - 2623829 | 43203.9 |
| duf4382 domain-containing protein | SSED_RS11330 | Not Available | Negative | 2624216 - 2625214 | 35678.9 |
| hypothetical protein | SSED_RS11335 | Not Available | Positive | 2625656 - 2626030 | 14026.2 |
| p-ii family nitrogen regulator | SSED_RS11340 | Not Available | Positive | 2626294 - 2626647 | 13225.7 |
| y-family dna polymerase | SSED_RS11345 | Not Available | Negative | 2626778 - 2628031 | 46811.5 |
| lexa family protein | SSED_RS11350 | Not Available | Negative | 2628167 - 2628592 | 15399.5 |
| manganese-dependent inorganic pyrophosphatase | SSED_RS11355 | Not Available | Positive | 2628767 - 2629687 | 33239.3 |
| acetate--coa ligase | SSED_RS11360 | Not Available | Positive | 2629931 - 2631697 | 65947.0 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | SSED_RS11365 | Not Available | Positive | 2631694 - 2632689 | 37059.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
