Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-glutamate ligase-like protein | SSED_RS10505 | Not Available | Negative | 2449280 - 2450242 | 35193.6 |
| uup1 family membrane protein | SSED_RS10510 | Not Available | Negative | 2450245 - 2451756 | 55663.9 |
| atp-dependent zinc protease | SSED_RS10515 | Not Available | Negative | 2451768 - 2452511 | 27053.4 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | SSED_RS10520 | Not Available | Negative | 2452610 - 2453602 | 37685.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | SSED_RS10525 | Not Available | Negative | 2453706 - 2454437 | 27555.8 |
| transporter substrate-binding domain-containing protein | SSED_RS10530 | Not Available | Positive | 2454584 - 2457382 | 104301.0 |
| aspartate--trna ligase | SSED_RS10535 | Not Available | Positive | 2457554 - 2459341 | 66290.5 |
| yebc/pmpr family dna-binding transcriptional regulator | SSED_RS10540 | Not Available | Positive | 2459429 - 2460175 | 26793.1 |
| crossover junction endodeoxyribonuclease ruvc | SSED_RS10545 | Not Available | Positive | 2460179 - 2460700 | 18490.2 |
| holliday junction branch migration protein ruva | SSED_RS10550 | Not Available | Positive | 2460697 - 2461314 | 22559.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
