Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hupe/urej family protein | SSED_RS10010 | Not Available | Positive | 2318118 - 2318825 | 25954.5 |
| hypothetical protein | SSED_RS10015 | Not Available | Positive | 2318938 - 2319639 | 24648.0 |
| ykgj family cysteine cluster protein | SSED_RS10020 | Not Available | Positive | 2319830 - 2320132 | 11307.5 |
| hydrogenase maturation nickel metallochaperone hypa | SSED_RS10025 | Not Available | Negative | 2320237 - 2320578 | 12482.3 |
| fad-dependent oxidoreductase | SSED_RS10030 | Not Available | Negative | 2320657 - 2323344 | 98064.6 |
| hydrogenase nickel incorporation protein hypb | SSED_RS10035 | Not Available | Negative | 2323457 - 2324128 | 24681.6 |
| ggdef domain-containing protein | SSED_RS23625 | Not Available | Positive | 2324596 - 2326500 | 71996.0 |
| exodeoxyribonuclease v subunit alpha | SSED_RS10045 | Not Available | Negative | 2326656 - 2328707 | 75559.9 |
| exodeoxyribonuclease v subunit beta | SSED_RS10050 | Not Available | Negative | 2328704 - 2332459 | 141205.0 |
| exodeoxyribonuclease v subunit gamma | SSED_RS10055 | Not Available | Negative | 2332461 - 2336024 | 134638.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
