Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase/urease nickel incorporation protein hypa | SSED_RS09865 | Not Available | Negative | 2282656 - 2283003 | 13070.8 |
| hydrogenase expression/formation protein hype | SSED_RS09870 | Not Available | Negative | 2283006 - 2284022 | 36042.4 |
| hydrogenase formation protein hypd | SSED_RS09875 | Not Available | Negative | 2284025 - 2285140 | 40666.3 |
| hypc/hybg/hupf family hydrogenase formation chaperone | SSED_RS09880 | Not Available | Negative | 2285145 - 2285384 | 8841.78 |
| hydrogenase nickel incorporation protein hypb | SSED_RS09885 | Not Available | Negative | 2285387 - 2286145 | 28071.1 |
| carbamoyltransferase hypf | SSED_RS09890 | Not Available | Negative | 2286248 - 2288599 | 86534.2 |
| hypothetical protein | SSED_RS09895 | Not Available | Negative | 2288603 - 2290330 | 64415.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | SSED_RS09900 | Not Available | Negative | 2290317 - 2290874 | 20779.9 |
| ni/fe-hydrogenase, b-type cytochrome subunit | SSED_RS09905 | Not Available | Negative | 2291055 - 2291720 | 25519.5 |
| nickel-dependent hydrogenase large subunit | SSED_RS09910 | Not Available | Negative | 2291743 - 2293446 | 62205.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
