Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4826 family protein | SSED_RS09775 | Not Available | Positive | 2263878 - 2264321 | 17125.3 |
| adenylosuccinate lyase | SSED_RS09780 | Not Available | Negative | 2264540 - 2265907 | 51150.2 |
| high frequency lysogenization protein hfld | SSED_RS09785 | Not Available | Negative | 2265936 - 2266550 | 22731.6 |
| trna 2-thiouridine(34) synthase mnma | SSED_RS09790 | Not Available | Negative | 2266554 - 2267672 | 41663.3 |
| pseudouridine synthase | SSED_RS09795 | Not Available | Negative | 2267919 - 2268629 | 27113.7 |
| nadp-dependent isocitrate dehydrogenase | SSED_RS09800 | Not Available | Positive | 2269013 - 2271238 | 80762.1 |
| cold shock domain-containing protein cspd | SSED_RS09805 | Not Available | Negative | 2271354 - 2271560 | 7294.58 |
| atp-dependent clp protease adapter clps | SSED_RS09810 | Not Available | Positive | 2271808 - 2272116 | 11577.0 |
| atp-dependent clp protease atp-binding subunit clpa | SSED_RS09815 | Not Available | Positive | 2272153 - 2274411 | 83216.8 |
| translation initiation factor if-1 | SSED_RS09820 | Not Available | Negative | 2274522 - 2274740 | 8275.21 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
