Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3137 domain-containing protein | SSED_RS00820 | Not Available | Positive | 180949 - 181959 | 39344.0 |
| lytic transglycosylase domain-containing protein | SSED_RS00825 | Not Available | Positive | 181968 - 182705 | 27245.6 |
| mate family efflux transporter | SSED_RS00830 | Not Available | Negative | 182868 - 184274 | 50672.1 |
| lysr family transcriptional regulator | SSED_RS00835 | Not Available | Positive | 184437 - 185330 | 33671.4 |
| duf4440 domain-containing protein | SSED_RS00840 | Not Available | Positive | 185416 - 185787 | 14292.4 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | SSED_RS00845 | Not Available | Negative | 185896 - 186738 | 31421.7 |
| class i sam-dependent methyltransferase | SSED_RS00850 | Not Available | Positive | 186935 - 187711 | 28332.3 |
| vanz family protein | SSED_RS00855 | Not Available | Negative | 187715 - 188101 | 14327.8 |
| hypothetical protein | SSED_RS00860 | Not Available | Negative | 188256 - 189107 | 32879.9 |
| two-component system sensor histidine kinase envz | SSED_RS00865 | Not Available | Negative | 189301 - 190611 | 49054.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
