Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative basic amino acid antiporter yfcc | SSED_RS08865 | Not Available | Positive | 2056843 - 2058384 | 54715.2 |
| tonb-dependent receptor | SSED_RS08870 | Not Available | Negative | 2059048 - 2061729 | 97424.1 |
| tdt family transporter | SSED_RS08875 | Not Available | Negative | 2062303 - 2063271 | 35132.3 |
| methyltransferase | SSED_RS08880 | Not Available | Negative | 2063388 - 2064461 | 40310.1 |
| cbs domain-containing protein | SSED_RS08885 | Not Available | Negative | 2064883 - 2065314 | 16016.5 |
| tetr/acrr family transcriptional regulator | SSED_RS08890 | Not Available | Positive | 2065598 - 2066263 | 25489.4 |
| cysteine synthase a | SSED_RS08895 | Not Available | Negative | 2066659 - 2067627 | 34520.4 |
| rdd family protein | SSED_RS08900 | Not Available | Positive | 2067922 - 2069133 | 44807.5 |
| response regulator | SSED_RS08905 | Not Available | Positive | 2069434 - 2070696 | 47731.9 |
| lysr substrate-binding domain-containing protein | SSED_RS08910 | Not Available | Negative | 2070700 - 2071614 | 34665.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
