Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate kinase | SSED_RS08820 | Not Available | Negative | 2043928 - 2045127 | 43289.0 |
| terminus macrodomain insulation protein yfbv | SSED_RS08825 | Not Available | Positive | 2045322 - 2045765 | 17124.4 |
| pyruvate formate lyase 1-activating protein | SSED_RS08830 | Not Available | Negative | 2045811 - 2046551 | 27960.6 |
| formate c-acetyltransferase | SSED_RS08835 | Not Available | Negative | 2046645 - 2048927 | 84511.5 |
| duf3360 family protein | SSED_RS08840 | Not Available | Negative | 2049531 - 2051063 | 54962.2 |
| formate transporter foca | SSED_RS08845 | Not Available | Positive | 2051994 - 2053469 | 53863.2 |
| elongation factor tu | SSED_RS24960 | Not Available | Negative | 2053538 - 2053660 | 4868.74 |
| lysr family transcriptional regulator | SSED_RS08850 | Not Available | Negative | 2053749 - 2054660 | 34603.4 |
| hypothetical protein | SSED_RS25070 | Not Available | Negative | 2055070 - 2055192 | 4233.9 |
| sodium/pantothenate symporter | SSED_RS08860 | Not Available | Positive | 2055213 - 2056664 | 52597.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
