Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SSED_RS08665 | Not Available | Positive | 2008622 - 2010160 | 57468.3 |
| abc transporter permease | SSED_RS08670 | Not Available | Positive | 2010151 - 2011143 | 35828.6 |
| abc transporter permease | SSED_RS08675 | Not Available | Positive | 2011140 - 2011970 | 30079.8 |
| atp-binding cassette domain-containing protein | SSED_RS08680 | Not Available | Positive | 2011957 - 2012673 | 25461.9 |
| atp-binding cassette domain-containing protein | SSED_RS08685 | Not Available | Positive | 2012657 - 2013247 | 21818.2 |
| hd-gyp domain-containing protein | SSED_RS08690 | Not Available | Positive | 2013538 - 2014743 | 45419.7 |
| tryptophan synthase subunit alpha | SSED_RS08695 | Not Available | Negative | 2014834 - 2015652 | 28324.1 |
| tryptophan synthase subunit beta | SSED_RS08700 | Not Available | Negative | 2015639 - 2016862 | 44050.0 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | SSED_RS08705 | Not Available | Negative | 2017013 - 2018446 | 52205.0 |
| anthranilate phosphoribosyltransferase | SSED_RS08710 | Not Available | Negative | 2018449 - 2019507 | 36784.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
