Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | SSED_RS08370 | Not Available | Negative | 1924798 - 1928097 | 119351.0 |
| efflux rnd transporter periplasmic adaptor subunit | SSED_RS08375 | Not Available | Negative | 1928108 - 1929151 | 38158.5 |
| simpl domain-containing protein | SSED_RS08380 | Not Available | Negative | 1929311 - 1930027 | 26666.0 |
| voc family protein | SSED_RS08385 | Not Available | Negative | 1930111 - 1930494 | 14123.5 |
| ompp1/fadl family transporter | SSED_RS08390 | Not Available | Negative | 1930627 - 1931949 | 47023.8 |
| sodium/proline symporter putp | SSED_RS08395 | Not Available | Negative | 1932317 - 1933768 | 51867.2 |
| duf3379 domain-containing protein | SSED_RS08400 | Not Available | Negative | 1933919 - 1934623 | 26229.4 |
| sigma-70 family rna polymerase sigma factor | SSED_RS08405 | Not Available | Negative | 1934616 - 1935179 | 21919.9 |
| batd family protein | SSED_RS08410 | Not Available | Negative | 1935287 - 1936921 | 60149.1 |
| vwa domain-containing protein | SSED_RS08415 | Not Available | Negative | 1937004 - 1938938 | 71573.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
