Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rodz domain-containing protein | SSED_RS07410 | Not Available | Positive | 1695671 - 1696603 | 33793.0 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SSED_RS07415 | Not Available | Positive | 1696707 - 1697822 | 40374.7 |
| histidine--trna ligase | SSED_RS07420 | Not Available | Positive | 1697982 - 1699256 | 47798.3 |
| yfgm family protein | SSED_RS07425 | Not Available | Positive | 1699270 - 1699890 | 21713.6 |
| outer membrane protein assembly factor bamb | SSED_RS07430 | Not Available | Positive | 1699902 - 1701089 | 42681.1 |
| ribosome biogenesis gtpase der | SSED_RS07435 | Not Available | Positive | 1701194 - 1702660 | 54690.6 |
| merr family transcriptional regulator | SSED_RS07440 | Not Available | Positive | 1703214 - 1704386 | 44773.7 |
| group ii intron reverse transcriptase/maturase | SSED_RS07445 | Not Available | Positive | 1705153 - 1706625 | 56032.6 |
| hypothetical protein | SSED_RS24820 | Not Available | Positive | 1706711 - 1706896 | 6171.42 |
| acyltransferase | SSED_RS07455 | Not Available | Negative | 1706979 - 1707635 | 23786.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
