Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | SSED_RS07310 | Not Available | Positive | 1672375 - 1673205 | 30464.5 |
| hypothetical protein | SSED_RS07315 | Not Available | Positive | 1673412 - 1673630 | 7958.34 |
| ggdef domain-containing protein | SSED_RS07320 | Not Available | Positive | 1673641 - 1675467 | 68517.0 |
| malate synthase a | SSED_RS07325 | Not Available | Positive | 1676315 - 1678033 | 64887.6 |
| isocitrate lyase | SSED_RS07330 | Not Available | Positive | 1678176 - 1679501 | 48319.7 |
| hdod domain-containing protein | SSED_RS07335 | Not Available | Positive | 1679881 - 1681362 | 54933.6 |
| nuclear transport factor 2 family protein | SSED_RS07340 | Not Available | Negative | 1681426 - 1681959 | 19698.5 |
| zinc-dependent peptidase | SSED_RS07345 | Not Available | Negative | 1682026 - 1682850 | 31596.7 |
| diguanylate cyclase | SSED_RS07350 | Not Available | Negative | 1682958 - 1684703 | 65482.9 |
| extracellular solute-binding protein | SSED_RS07355 | Not Available | Negative | 1684700 - 1686136 | 53799.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
