Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna alkylation repair protein | SSED_RS06925 | Not Available | Negative | 1590298 - 1591020 | 28072.0 |
| hypothetical protein | SSED_RS06930 | Not Available | Negative | 1591027 - 1591503 | 18325.3 |
| s41 family peptidase | SSED_RS06935 | Not Available | Positive | 1591692 - 1594976 | 121818.0 |
| duf481 domain-containing protein | SSED_RS06940 | Not Available | Positive | 1595219 - 1596106 | 33341.9 |
| hypothetical protein | SSED_RS06945 | Not Available | Positive | 1596266 - 1596835 | 20190.7 |
| hypothetical protein | SSED_RS06950 | Not Available | Negative | 1597648 - 1598136 | 17328.7 |
| duf3325 domain-containing protein | SSED_RS06955 | Not Available | Negative | 1598277 - 1598618 | 12438.4 |
| pepsy-associated tm helix domain-containing protein | SSED_RS06960 | Not Available | Negative | 1598623 - 1600293 | 62906.6 |
| duf3649 domain-containing protein | SSED_RS06965 | Not Available | Negative | 1600297 - 1600596 | 10947.7 |
| ribosome hibernation-promoting factor, hpf/yfia family | SSED_RS06970 | Not Available | Positive | 1601225 - 1601581 | 13085.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
