Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | SSED_RS06430 | Not Available | Positive | 1483782 - 1484150 | 13423.6 |
| hypothetical protein | SSED_RS06435 | Not Available | Negative | 1484207 - 1484422 | 7557.05 |
| nad(p)/fad-dependent oxidoreductase | SSED_RS06440 | Not Available | Negative | 1484582 - 1485883 | 47658.9 |
| hypothetical protein | SSED_RS06445 | Not Available | Negative | 1486295 - 1486657 | 13712.1 |
| efflux rnd transporter periplasmic adaptor subunit | SSED_RS06450 | Not Available | Positive | 1487281 - 1488456 | 42800.5 |
| efflux rnd transporter permease subunit | SSED_RS06455 | Not Available | Positive | 1488469 - 1491585 | 112140.0 |
| cold-shock protein | SSED_RS06460 | Not Available | Positive | 1491913 - 1492125 | 7556.76 |
| l-threonine dehydrogenase | SSED_RS06465 | Not Available | Negative | 1493116 - 1494264 | 39884.1 |
| porin | SSED_RS06470 | Not Available | Positive | 1494644 - 1495804 | 43537.6 |
| ybak/ebsc family protein | SSED_RS06475 | Not Available | Negative | 1496104 - 1496583 | 18080.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
