Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | SSED_RS06135 | Not Available | Positive | 1424387 - 1424809 | 14629.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SSED_RS06140 | Not Available | Positive | 1424813 - 1425760 | 34425.0 |
| type iv pilus modification protein pilv | SSED_RS06145 | Not Available | Positive | 1426002 - 1426523 | 18520.2 |
| pilw family protein | SSED_RS06150 | Not Available | Positive | 1426524 - 1427510 | 35829.7 |
| pilx n-terminal domain-containing pilus assembly protein | SSED_RS06155 | Not Available | Positive | 1427523 - 1427957 | 14821.9 |
| pilus assembly protein | SSED_RS06160 | Not Available | Positive | 1427962 - 1431537 | 127971.0 |
| type iv pilin protein | SSED_RS06165 | Not Available | Positive | 1431537 - 1431929 | 13996.8 |
| tapy2 family type iva secretion system protein | SSED_RS06170 | Not Available | Positive | 1431926 - 1432228 | 11344.7 |
| gsph/fimt family pseudopilin | SSED_RS25140 | Not Available | Negative | 1432306 - 1432494 | 6372.55 |
| gsph/fimt family pseudopilin | SSED_RS06175 | Not Available | Negative | 1432491 - 1432979 | 17184.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
