Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | SSED_RS05835 | Not Available | Positive | 1357815 - 1359014 | 41910.6 |
| hypothetical protein | SSED_RS05840 | Not Available | Positive | 1359011 - 1359394 | 14196.1 |
| transcriptional activator nhar | SSED_RS05845 | Not Available | Positive | 1359421 - 1360329 | 34351.7 |
| succinate dehydrogenase assembly factor 2 | SSED_RS05850 | Not Available | Positive | 1360399 - 1360638 | 9296.33 |
| protein ygfx | SSED_RS24940 | Not Available | Positive | 1360619 - 1361050 | 17033.8 |
| l-aspartate oxidase | SSED_RS05855 | Not Available | Negative | 1361107 - 1362717 | 59675.7 |
| rna polymerase sigma factor rpoe | SSED_RS05860 | Not Available | Positive | 1362918 - 1363496 | 21885.0 |
| sigma-e factor negative regulatory protein | SSED_RS05865 | Not Available | Positive | 1363524 - 1364144 | 22735.8 |
| mucb/rseb c-terminal domain-containing protein | SSED_RS05870 | Not Available | Positive | 1364174 - 1365106 | 34790.0 |
| soxr reducing system rsec family protein | SSED_RS05875 | Not Available | Positive | 1365131 - 1365586 | 16534.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
