Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | SSED_RS05495 | Not Available | Positive | 1269405 - 1270457 | 38153.2 |
| hypothetical protein | SSED_RS05500 | Not Available | Negative | 1270587 - 1271237 | 22719.1 |
| hypothetical protein | SSED_RS05505 | Not Available | Negative | 1272113 - 1272535 | 16041.0 |
| hypothetical protein | SSED_RS25060 | Not Available | Positive | 1272625 - 1272753 | 4788.7 |
| Trna-met | Not Available | Not Available | Positive | 1272823 - 1272899 | Not Available |
| rna polymerase sigma factor rpod | SSED_RS05515 | Not Available | Negative | 1273107 - 1274936 | 69573.1 |
| dna primase | SSED_RS05520 | Not Available | Negative | 1275068 - 1276789 | 65143.4 |
| gatb/yqey domain-containing protein | SSED_RS05525 | Not Available | Negative | 1276887 - 1277330 | 16053.9 |
| 30s ribosomal protein s21 | SSED_RS05530 | Not Available | Negative | 1277337 - 1277552 | 8345.34 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | SSED_RS05535 | Not Available | Positive | 1277942 - 1278955 | 36089.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
