Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SSED_RS05350 | Not Available | Positive | 1235745 - 1235927 | 7199.49 |
| torf family putative porin | SSED_RS05355 | Not Available | Negative | 1236002 - 1236721 | 26542.9 |
| cupin domain-containing protein | SSED_RS05360 | Not Available | Negative | 1236859 - 1237242 | 14289.7 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | SSED_RS05365 | Not Available | Negative | 1237318 - 1238808 | 53507.4 |
| aspartate aminotransferase family protein | SSED_RS05370 | Not Available | Negative | 1238919 - 1240256 | 48230.6 |
| aldehyde dehydrogenase | SSED_RS05375 | Not Available | Positive | 1240591 - 1242102 | 53950.6 |
| dicarboxylate/amino acid:cation symporter | SSED_RS05380 | Not Available | Negative | 1242162 - 1243364 | 41958.9 |
| substrate-binding periplasmic protein | SSED_RS05385 | Not Available | Negative | 1243683 - 1244459 | 29118.7 |
| ribokinase | SSED_RS05390 | Not Available | Negative | 1244631 - 1245536 | 31853.9 |
| pyrimidine-specific ribonucleoside hydrolase riha | SSED_RS05395 | Not Available | Negative | 1245613 - 1246551 | 33867.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
