Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | SSED_RS23595 | Not Available | Negative | 1227131 - 1228420 | 47874.9 |
| response regulator transcription factor | SSED_RS05305 | Not Available | Negative | 1228423 - 1229121 | 26481.0 |
| hypothetical protein | SSED_RS23600 | Not Available | Negative | 1229186 - 1229560 | 13845.6 |
| reprolysin-like metallopeptidase | SSED_RS05315 | Not Available | Negative | 1229557 - 1232217 | 93650.4 |
| hypothetical protein | SSED_RS05320 | Not Available | Negative | 1232376 - 1232858 | 18449.9 |
| marr family winged helix-turn-helix transcriptional regulator | SSED_RS05325 | Not Available | Positive | 1233014 - 1233283 | 10009.0 |
| hotdog fold domain-containing protein | SSED_RS05330 | Not Available | Negative | 1233285 - 1233761 | 17869.2 |
| duf368 domain-containing protein | SSED_RS05335 | Not Available | Positive | 1233988 - 1234920 | 33499.4 |
| hypothetical protein | SSED_RS05340 | Not Available | Positive | 1234925 - 1235131 | 7371.89 |
| duf3634 family protein | SSED_RS05345 | Not Available | Negative | 1235181 - 1235525 | 12932.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
