Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sediminis |
| Strain | HAW-EB3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 10 |
| Temperature range | Psychrophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles- Pairs |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1484345 bp
Thymine Count
1490902 bp
Guanine Count
1269677 bp
Cytosine Count
1272750 bp
Genome Length
5517674 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | SSED_RS05095 | Not Available | Negative | 1175561 - 1175980 | 16202.6 |
| voc family protein | SSED_RS05100 | Not Available | Negative | 1176021 - 1176407 | 15268.2 |
| nad(p)h-dependent oxidoreductase | SSED_RS05105 | Not Available | Negative | 1176429 - 1177085 | 24393.3 |
| helix-turn-helix transcriptional regulator | SSED_RS05110 | Not Available | Positive | 1177229 - 1177849 | 23396.1 |
| pseudouridine synthase | SSED_RS05115 | Not Available | Positive | 1177863 - 1178564 | 26616.2 |
| lysr family transcriptional regulator | SSED_RS05120 | Not Available | Positive | 1178674 - 1179639 | 36301.0 |
| omca/mtrc family decaheme c-type cytochrome | SSED_RS05125 | Not Available | Positive | 1179811 - 1182111 | 80116.8 |
| acetate uptake transporter | SSED_RS05130 | Not Available | Positive | 1182926 - 1183537 | 21729.1 |
| mfs transporter | SSED_RS05135 | Not Available | Negative | 1183639 - 1185171 | 56132.1 |
| gnat family n-acetyltransferase | SSED_RS05140 | Not Available | Positive | 1185661 - 1186221 | 21463.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
