Janthinobacterium sp. Marseille

Gram-negativeBacilliMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium sp. Marseille is a Gram-negative bacterium characterized by its bacilli shape and mobility, which is facilitated by the presence of flagella. This organism thrives in aquatic environments and is classified as mesophilic, indicating that it prefers moderate temperature ranges for growth. The bacterium possesses a single replicon and is surrounded by two membranes, a feature typical of Gram-negative bacteria. Notably, Janthinobacterium sp. Marseille is free-living, meaning it does not rely on a host organism for survival. This independence from a host contributes to its ecological role in aquatic ecosystems, where it likely participates in nutrient cycling and may interact with other microorganisms. Importantly, Janthinobacterium sp. Marseille is not pathogenic, suggesting that it does not cause disease in humans or other organisms. This characteristic makes it an interesting subject for further study in the context of environmental microbiology, particularly in understanding the roles of non-pathogenic bacteria in aquatic environments. Overall, the ecological insight into Janthinobacterium sp. Marseille highlights the importance of non-pathogenic, free-living bacteria in maintaining the balance of aquatic ecosystems, where they may contribute to biodegradation and nutrient cycling processes. The strain is cataloged under the accession number NC_009659.1, providing a reference point for researchers interested in exploring its genetic and functional properties further.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium sp. Marseille
StrainMarseille

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Janthinobacterium sp. Marseille
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Janthinobacterium sp. Marseille, complete sequence.

Gene Summary

Adenine Count

938415 bp

Thymine Count

942675 bp

Guanine Count

1114221 bp

Cytosine Count

1114940 bp

Genome Length

4110251 bp

Protein-coding Genes

3740 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptor plug domain-containing proteinMMA_RS19025Not AvailableNegative4074243 - 407626774644.2
ofa family mfs transporterMMA_RS19030Not AvailablePositive4076704 - 407810750066.1
mfs transporter small subunitMMA_RS19035Not AvailablePositive4078124 - 40782584893.05
sigma-54-dependent transcriptional regulatorMMA_RS19040Not AvailablePositive4078439 - 407982750909.3
cache domain-containing proteinMMA_RS19045Not AvailablePositive4079852 - 408186773647.5
hypothetical proteinMMA_RS19050Not AvailableNegative4081935 - 408224910273.0
nucleobase:cation symporter-2 family proteinMMA_RS19055Not AvailableNegative4082450 - 408379947013.5
glutathione s-transferaseMMA_RS19060Not AvailableNegative4083974 - 408465125437.5
rieske 2fe-2s domain-containing proteinMMA_RS19065Not AvailableNegative4084658 - 408640063162.2
aromatic ring-hydroxylating oxygenase subunit alphaMMA_RS19070Not AvailableNegative4086421 - 408727231821.8

Displaying genes 3851 – 3860 of 3880 in total

Metabolites

1856 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1856 metabolites

Health Effects

No health effects information available for this bacterium.