Janthinobacterium sp. Marseille

Gram-negativeBacilliMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis) was isolated in haemodialysis water despite microbiological control by filtration and chemicals. Its very small size allows it to pass through filters. (HAMAP: JANMA)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium sp. Marseille
StrainMarseille

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Janthinobacterium sp. Marseille
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Janthinobacterium sp. Marseille

NC_009659.1

Gene Summary

Adenine Count

938415 bp

Thymine Count

942675 bp

Guanine Count

1114221 bp

Cytosine Count

1114940 bp

Genome Length

4110251 bp

Protein-coding Genes

3740 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
LysozymeMMA_RS11315Not Available-2465292 - 246573216627.1
Hypothetical proteinMMA_RS20220Not Available+2465788 - 246642623403.9
Hypothetical proteinMMA_RS11325Not Available-2466488 - 246692515384.0
Putative tail assembly chaperoneMMA_RS11335Not Available-2467173 - 246749912058.3
Hypothetical proteinMMA_RS19890Not Available-2467502 - 246926859838.1
Hypothetical proteinMMA_RS11345Not Available-2469447 - 247100652594.9
hypothetical proteinMMA_RS11350Not Available-2471006 - 247236447948.1
hypothetical proteinMMA_RS11355Not Available-2472367 - 24726068365.94
iron-containing redox enzyme family proteinMMA_RS11360Not Available-2472603 - 247321423217.7
Structural proteinMMA_RS11365Not Available-2473214 - 247413131853.2

Displaying genes 1 – 10 of 3880 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1805 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1805 metabolites