Clostridium beijerinckii NCIMB 8052

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium beijerinckii NCIMB 8052 is a Gram-positive, mesophilic anaerobic bacterium primarily found in freshwater and soil habitats. This species is characterized by its rod shape and the presence of flagella, which contribute to its mobility. C. beijerinckii NCIMB 8052 is classified as a chemoorganotroph, utilizing organic compounds as its energy source. The organism typically exists as single cells or in pairs and is noted for its ability to sporulate, enabling it to survive in challenging environmental conditions. It has a single replicon and is surrounded by one membrane, indicating a relatively simple cellular structure compared to more complex bacteria. C. beijerinckii NCIMB 8052 is free-living and does not exhibit pathogenicity, making it an interesting subject for study in both ecological and biotechnological contexts. Its capacity to thrive in anaerobic environments suggests potential roles in nutrient cycling and organic matter degradation in soil and freshwater ecosystems. The ability to sporulate and its anaerobic lifestyle may provide insights into its ecological niches and interactions within microbial communities. Overall, C. beijerinckii NCIMB 8052 exemplifies the diversity of bacterial life adapted to specific environmental conditions, highlighting its importance in the broader context of microbial ecology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium beijerinckii
StrainNCIMB 8052

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium beijerinckii NCIMB 8052
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water - Soil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationSporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Clostridium beijerinckii NCIMB 8052, complete sequence.

Gene Summary

Adenine Count

2121554 bp

Thymine Count

2087554 bp

Guanine Count

904841 bp

Cytosine Count

886683 bp

Genome Length

6000632 bp

Protein-coding Genes

5189 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseCBEI_RS18505Not AvailablePositive4157766 - 415973978320.3
duf6262 family proteinCBEI_RS18510Not AvailablePositive4159741 - 416011514391.6
hypothetical proteinCBEI_RS18515Not AvailablePositive4160173 - 416087127886.1
voc family proteinCBEI_RS18520Not AvailablePositive4160975 - 416142717054.5
isncy-like element iscb1 family transposaseCBEI_RS26705Not AvailableNegative4161618 - 41618658438.6
virginiamycin b lyaseCBEI_RS18530Not AvailableNegative4161878 - 416276531858.7
methionyl aminopeptidaseCBEI_RS18535Not AvailableNegative4163300 - 416416931966.0
duf5680 domain-containing proteinCBEI_RS18540Not AvailableNegative4164190 - 416487026160.8
hypothetical proteinCBEI_RS27520Not AvailableNegative4165072 - 41653269584.28
sdr family oxidoreductaseCBEI_RS18545Not AvailableNegative4165414 - 416643937457.5

Displaying genes 3841 – 3850 of 5417 in total

Metabolites

521 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 521 metabolites

Health Effects

No health effects information available for this bacterium.