Parabacteroides distasonis ATCC 8503

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides distasonis ATCC 8503 is a Gram-positive, anaerobic bacterium characterized by its rod shape and non-motility. It exhibits a mesophilic temperature range, thriving in moderate temperature conditions. This species contains one replicon and possesses two membranes, indicative of its Gram-positive classification. P. distasonis is free-living and does not have any known pathogenicity, which suggests it plays a non-harmful role within its ecological niche. Its inability to form spores indicates a reliance on specific environmental conditions for survival and reproduction. The organism's habitat is host-associated, meaning it is commonly found within the gastrointestinal tracts of various hosts. This association suggests that P. distasonis may contribute to the complex microbial communities in these environments, potentially influencing host health and digestion. Overall, the ecological function of Parabacteroides distasonis ATCC 8503 could be significant in maintaining gut homeostasis, aiding in nutrient absorption, and competing with pathogenic microorganisms. Its role as a free-living, non-pathogenic bacterium highlights the importance of such organisms in promoting a balanced microbiome in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides distasonis
StrainATCC 8503

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Parabacteroides distasonis ATCC 8503
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Parabacteroides distasonis ATCC 8503, complete sequence.

Gene Summary

Adenine Count

1330116 bp

Thymine Count

1313276 bp

Guanine Count

1088059 bp

Cytosine Count

1079928 bp

Genome Length

4811379 bp

Protein-coding Genes

3920 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorBDI_RS18770Not AvailableNegative4575529 - 457581310745.0
hypothetical proteinBDI_RS19945Not AvailableNegative4575955 - 457662025909.9
site-specific integraseBDI_RS18780Not AvailableNegative4576630 - 457778143631.4
hypothetical proteinBDI_RS18785Not AvailablePositive4578103 - 457847114194.4
ompa family proteinBDI_RS18790Not AvailableNegative4578463 - 458043974484.9
hypothetical proteinBDI_RS18795Not AvailablePositive4580570 - 45807285985.46
type ii toxin-antitoxin system rele/pare family toxinBDI_RS18800Not AvailablePositive4580716 - 458104812865.5
s-adenosylmethionine:trna ribosyltransferase-isomeraseBDI_RS18805Not AvailableNegative4581008 - 458222246130.2
duf2027 domain-containing proteinBDI_RS18810Not AvailablePositive4582347 - 458342941443.5
cyth domain-containing proteinBDI_RS18815Not AvailablePositive4583419 - 458389217763.1

Displaying genes 3801 – 3810 of 4026 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

496 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 496 metabolites

Health Effects

No health effects information available for this bacterium.