Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family metallopeptidase | BVU_RS04775 | Not Available | Positive | 1240496 - 1241056 | 20681.9 |
| hypothetical protein | BVU_RS04780 | Not Available | Positive | 1241028 - 1241369 | 13584.5 |
| hth domain-containing protein | BVU_RS21025 | Not Available | Positive | 1241366 - 1241644 | 10960.2 |
| inlb b-repeat-containing protein | BVU_RS04790 | Not Available | Positive | 1241684 - 1242745 | 38868.8 |
| rna polymerase sigma-70 factor | BVU_RS04795 | Not Available | Negative | 1243619 - 1244167 | 22036.5 |
| fecr family protein | BVU_RS21030 | Not Available | Positive | 1244452 - 1245405 | 37431.2 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS04805 | Not Available | Positive | 1245444 - 1248845 | 126159.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS04810 | Not Available | Positive | 1248858 - 1250771 | 73437.9 |
| bt_3987 domain-containing protein | BVU_RS04815 | Not Available | Positive | 1250808 - 1252160 | 50619.8 |
| m60 family metallopeptidase | BVU_RS04820 | Not Available | Positive | 1252260 - 1255169 | 110202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

