Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | BVU_RS04450 | Not Available | Positive | 1179994 - 1180935 | 36180.1 |
| tetratricopeptide repeat protein | BVU_RS04455 | Not Available | Positive | 1181077 - 1182753 | 60893.8 |
| thioredoxin-like domain-containing protein | BVU_RS04460 | Not Available | Positive | 1182907 - 1183974 | 40488.1 |
| yifb family mg chelatase-like aaa atpase | BVU_RS04465 | Not Available | Positive | 1183979 - 1185517 | 56291.0 |
| hypothetical protein | BVU_RS22495 | Not Available | Negative | 1185519 - 1185686 | 6591.64 |
| methionine--trna ligase | BVU_RS04470 | Not Available | Positive | 1185973 - 1188015 | 77707.9 |
| lipopolysaccharide biosynthesis protein | BVU_RS04475 | Not Available | Positive | 1188097 - 1189533 | 53539.4 |
| acyltransferase | BVU_RS04480 | Not Available | Positive | 1189533 - 1190558 | 39502.3 |
| hypothetical protein | BVU_RS04485 | Not Available | Negative | 1190581 - 1191411 | 31878.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | BVU_RS04490 | Not Available | Positive | 1191502 - 1193307 | 70271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

