Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BVU_RS04400 | Not Available | Positive | 1169696 - 1172337 | 98226.3 |
| omph family outer membrane protein | BVU_RS04405 | Not Available | Positive | 1172358 - 1172873 | 18937.6 |
| omph family outer membrane protein | BVU_RS04410 | Not Available | Positive | 1172931 - 1173434 | 19260.2 |
| glutamate racemase | BVU_RS04415 | Not Available | Positive | 1173537 - 1174382 | 31392.0 |
| pyridoxamine kinase | BVU_RS04420 | Not Available | Positive | 1174439 - 1175311 | 32647.3 |
| ftsx-like permease family protein | BVU_RS04425 | Not Available | Negative | 1175698 - 1176936 | 45679.9 |
| 30s ribosome-binding factor rbfa | BVU_RS04430 | Not Available | Negative | 1176946 - 1177281 | 12972.9 |
| o-methyltransferase | BVU_RS04435 | Not Available | Negative | 1177355 - 1177993 | 24383.5 |
| pyruvate kinase | BVU_RS04440 | Not Available | Negative | 1178009 - 1179472 | 54241.6 |
| type ii 3-dehydroquinate dehydratase | BVU_RS04445 | Not Available | Negative | 1179505 - 1179927 | 15666.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

