Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS03865 | Not Available | Positive | 1071548 - 1073113 | 58966.7 |
| helix-turn-helix transcriptional regulator | BVU_RS22985 | Not Available | Negative | 1073242 - 1073334 | 3686.36 |
| hypothetical protein | BVU_RS03870 | Not Available | Positive | 1073532 - 1073804 | 9728.24 |
| duf4221 domain-containing protein | BVU_RS03875 | Not Available | Positive | 1073928 - 1075091 | 45427.0 |
| duf1573 domain-containing protein | BVU_RS03880 | Not Available | Positive | 1075088 - 1075816 | 27173.6 |
| acyl-coa thioesterase | BVU_RS03885 | Not Available | Negative | 1075881 - 1076324 | 16804.2 |
| transposase family protein | BVU_RS03890 | Not Available | Positive | 1076374 - 1076724 | 13836.2 |
| transposase | BVU_RS03895 | Not Available | Positive | 1076735 - 1077739 | 39032.1 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | BVU_RS03900 | Not Available | Positive | 1077919 - 1079196 | 46994.8 |
| sdr family nad(p)-dependent oxidoreductase | BVU_RS03905 | Not Available | Positive | 1079207 - 1079935 | 27088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

